News

New SABIO-RK paper

11-06-2017

SABIO-RK update paper published in Database issue of Nucleic Acid Research:
https://doi.org/10.1093/nar/gkx1065


More export formats supported

10-12-2017

Besides SBML, SBBioPax and spreadsheet export, SABIO-RK supports now the export of kinetics data in a variety of additional formats including e.g. Matlab, BioPAX level 2 and level 3, DOT, Octave, XPP and SBGNML.


SABIO-RK in MetaNetX

09-26-2017

MetaNetX integrated SABIO-RK and implemented cross-references to compounds and reactions in SABIO-RK.
MetaNetX is an online platform for accessing, analyzing and manipulating genome-scale metabolic networks as well as biochemical pathways.


SABIO-RK at ICSB2017

05-29-2017

COMBINE - de.NBI Tutorial: Modelling and Simulation Tools in Systems Biology


Dates: Sunday, August 6th, 2017
(9:00 - 18:00)

Location: BLacksburg, Virginia (USA)

Website: http://co.mbine.org/events/tutorial2017

This tutorial workshop is a satellite of the 18th International Conference on Systems Biology (ICSB). Participants will learn how to set up computer models of biological systems (e.g. metabolic or signalling networks) using experimental kinetic data and how to simulate them in different systems biology platforms. Hands-on sessions, lectures and software demonstrations will be included, providing attendees with the necessary skills to access experime ntal kinetics data from available resources, to assemble computer models with these data, and finally to simulate the generated models using simulation tools. Also handling and exchange of biological models based on existing community standards will be dem onstrated along with the basic principles of the underlying standard formats.